UniversalEPI predictions

Predictions of UniversalEPI on ATAC-seq data from ENCODE cell lines and primary cells in humans are available below.

• The "raw" directory contains log-transformed ICE-normalized Hi-C predictions by UniversalEPI.
• The "z_score" directory contains z-score normalized Hi-C predictions by UniversalEPI.

The information on input datasets can be found in UniversalEPI_files_ENCODE.xlsx

The files can be visualized in UCSC Genome Browser using the track hub at TBD.

	Name	Last modified	Size	Description
	Parent Directory		-
	UniversalEPI_files_ENCODE.xlsx	2025-06-25 18:51	19K
	normalized_atac/	2025-06-27 21:43	-
	raw/	2025-06-25 16:09	-
	ucsc_track_hub/	2025-07-03 14:52	-
	z_score/	2025-06-25 16:10	-

Contact valentina.boeva@inf.ethz.ch if you have questions.